Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTALPARLDGVVIGVLLDVPDA---AAPVVAYPGCPS-------------EHGLAAATTTQLSRAD------------IGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN
1WTH Chain:A ((11-103))
---------------------FVGVVEDRMDPLKLGRVRVRVVGLHPPQRAQGDVMGIPTEKLPWMSVIQPITSAAMSGIGGSVTGPVEGTRVYGHFLDKWKTNGIVLGTYGGIVREKPNRLEGFSDPTGQYPRRLGNDTNVLNQGGEVGYDSSSNVIQDSNLDTAINPDDRPLSEI
General information:
TITO was launched using:
RESULT:
Template:
1WTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43351 for 376 contacts (-115.3/contact) +
2D Compatibility (PS) -6902 + (NN) -2827 + (LL) 1380
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -55900.0 ( -148.67 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_1WTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WTH-query.scw
PDB file :
Tito_Scwrl_1WTH.pdb
: