Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGFMQYSQRLGEAGRNDRRSMRGAFRPGLLPTLVVLGLLPVLLWLGTWQLQRADEKR-ALLASYEARRGAEPVSPGQLEGLRDPAYVRVRLHGRFDERHTLLLDNRLRNGQAGVEVLQPFYDQASGLWLLVNRGWVAWTDRRSPPTLETPDRVLLLDAWTYLPPPGGLHLADAPAGGWPRLVTQLDIPALWQAFG-RAGLPWEIRLEPGDASFDTD------WPLVSMPPERHTGYAVQWFALATALLALYLYLGVRRAREKNHESRDSDA |
| 4D79 Chain:A ((3-268)) | VVISDAWRQRFGGTARLYGEKALQLFAD---AHICVVGIGGV----GSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNV--------GLAKAEVMAERIRQINPECRVTVVDDFVT-PDNVAQYMSVGYSYVID---AIDSVRPKAALIAYCRRNKIP-----LVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPG-----FGAATMVTATFGFVAVSHALKKMMAKAARQG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49712 for 1991 contacts (-25.0/contact) +
2D Compatibility (PS) -25567 + (NN) -13128 + (LL) 2320
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: -93687.0 ( -47.06 by residue)
QMean score : 0.234
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