Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------MATVIDRHSQPTWRDFLE-----------LTKPKVVVLM----------------LITSLIGMLLATKAPLDGFVPWQVLIFGNLGIGL-CAGAAAAVNHVVDRR---IDSIMARTHKRP------LAEGRVSPSMALGFALLLALAGMA-----VLLAFTNPLTAWLTLASLLGY----AALYTGFLKR---------------ATPQNIVI-GGLAGAAPPLLGWVAITGH--------------LSAEPL----LLVLIIFAW-TPPHFWA--------LCIHRKDEYAKADI----PMLPVTHGERYTKLHILLYTL------------VLFAVSLMPFVI----HMSGLVYLLCALALGARFLDWAWALYCDSRPHAAIKTFKYSIVYLFLLFMALLVDHYLPLKLLL |
| 4C2E Chain:A ((2-436)) | ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMEDGKIIIVSPFKKSPAEKAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLETVFASEKKVQGHSVGYIAISTFSEHTTEDFAKALRELEKKEIEGLVIDVRGNPGGYIQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAYPVNVITDKGSAAASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSNIKLTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGIIDTRTAETLNQQIEKKKSDEKNDLQLQTALKSLFV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193237 for 1821 contacts (-106.1/contact) +
2D Compatibility (PS) -29182 + (NN) 3624 + (LL) 2928
1D Compatibility (HY) -3600 + (ID) 2800
Total energy: -222267.0 ( -122.06 by residue)
QMean score : 0.095
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