Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLG--VRRFDDFERSL-GVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
3DF8 Chain:A ((9-108))
----DTEICIDPSESVLHLLGKKYTMLIISVLGNGSTRQNFNDIRSSIPGISSTILSRRIKDLIDSGLVERRSGQ----ITTYALTEKGMNVRNSLMPLLQYISVLDRN---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DF8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71471 for 611 contacts (-117.0/contact) +
2D Compatibility (PS) -9772 + (NN) 2655 + (LL) 3680
1D Compatibility (HY) -8000 + (ID) 1200
Total energy: -84108.0 ( -137.66 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_3DF8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DF8-query.scw
PDB file :
Tito_Scwrl_3DF8.pdb
: