Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPADGEAARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQELFLRFWRRPAA--PVEELGSYLLRSARNLAIDHLRGEGSRQRQLDDWLPEQRQGEPVGPEQALEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRALDACKASLAGPAGEQARSAQP
2O7G Chain:A ((17-91))
---SAAKGNGRALEAFIKATQQDVWRFVAYL-SDVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIR--------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29772 for 485 contacts (-61.4/contact) +
2D Compatibility (PS) -8127 + (NN) -8034 + (LL) 7796
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -41487.0 ( -85.54 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2O7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O7G-query.scw
PDB file :
Tito_Scwrl_2O7G.pdb
: