Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSRKINKSRLALAITAGTLGALAQQAVAAGFIEDSKASLTLRNFYINTDNRNGTASPSKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRLDGGGRAGKSGLDRQPGTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQ-YYYGNLDDFYKQHFLGLIHNWQIGPGVLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTA--RGDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSGLPAAGSSNNQRDQDENRLIVSYTLPLL
3SZD Chain:A ((8-397))------------------------------GFLEDAKASLTARNFHLHR-NFVG----GKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLKLDGG------------------------ADDFGRLAVAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGRPAAT-----SDRFDFAGGEYRFNGERSLLGLWNAELKDIYRQQYLQLQHSQPLGDWLLGANLGGFRGRDAG-----SARA---------------GKLDNRTVSALFSARYGLHTLYLGLQKVSGDDGWMRVNGTSG----GTLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDW-----G---R-FDENRLIVSYPLSLL


General information:
TITO was launched using:
RESULT:

Template: 3SZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3998 for 2897 contacts (1.4/contact) +
2D Compatibility (PS) -38073 + (NN) -9741 + (LL) 2556
1D Compatibility (HY) -29200 + (ID) 7950
Total energy: -78410.0 ( -27.07 by residue)
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_3SZD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SZD-query.scw
PDB file : Tito_Scwrl_3SZD.pdb: