Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSG-EAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLA--AVDPDNRHAVPYLWGAVGLAINTPQAEAAY-GGPLPNSWSLLFD--ASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSER-YIADLEGGRLCLAMAWVGDALRAAK------AGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH |
| 3TTN Chain:A ((6-340)) | ---------------------SLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQ-LEVSD-PGNQYAVPYLWGTNGIGYNVAKVKE-VLGDQPIDSWAILFEPENM--KKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFH-SSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188784 for 2803 contacts (-67.4/contact) +
2D Compatibility (PS) -34831 + (NN) -19111 + (LL) 2688
1D Compatibility (HY) -27600 + (ID) 5350
Total energy: -272988.0 ( -97.39 by residue)
QMean score : 0.595
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