Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPYALLSLLATGTLLAQGAWAEDPEVLFKNKGCVACHAIDTKMVGPAYKDVAAKFAGQAGAEAELAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWVLSQK
3ZOY Chain:D ((4-79))
---------------------------LAKKNNCIACHQVETKVVGPALKDIAAKYADKDDAATYLAGKIKGGSSGVWGQIPMPPVNVSDADAKALADWILTL-
General information:
TITO was launched using:
RESULT:
Template:
3ZOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28705 for 508 contacts (-56.5/contact) +
2D Compatibility (PS) -8492 + (NN) -4792 + (LL) 2256
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -49833.0 ( -98.10 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3ZOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZOY-query.scw
PDB file :
Tito_Scwrl_3ZOY.pdb
: