Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPAVTPGWPAIPPGATLGGFDGQGRRSWATISRAPSGASCSRNRSATRTYGWGATATTPATITGIPSTTAPAT
4CVO Chain:A ((9-77))
LELQGLGV------DVYDQDVLEQGVLQQVDNAIHEASRASQLVDVEKEYRSVLDDLTSCTTSLRQINKIIEQLS
General information:
TITO was launched using:
RESULT:
Template:
4CVO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4488 for 277 contacts (16.2/contact) +
2D Compatibility (PS) -6769 + (NN) 5442 + (LL) 52
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 1363.0 ( 4.92 by residue)
QMean score : 0.070
(partial model without unconserved sides chains):
PDB file :
Tito_4CVO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CVO-query.scw
PDB file :
Tito_Scwrl_4CVO.pdb
: