Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGD-DGCPYLCPGTPQRPGYLVEALSQVLR---EPPHFDSLPWPRAVQMVRDGHRDGLVG-AYGL----DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 1WDN Chain:A ((4-224)) | ----------------------KLVVATDTAFVPFEFKQGDLYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFS-DGYYKSGLLVMVKANNN-DVKSVKDLDGKVVAVKSGTGSVDYAKANIK-------TKDLRQ-FPNIDNAYMELGTNRADAVLHDTPNILYFIKTA-GN-GQFKAVGDSLEAQQYGIAFPKG---SDELRDKVNGALKTLRENGTYNEIYKKWFGTEP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74424 for 1732 contacts (-43.0/contact) +
2D Compatibility (PS) -22921 + (NN) -13374 + (LL) 2660
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -115509.0 ( -66.69 by residue)
QMean score : 0.377
|
|
|