Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
3KEG Chain:B ((2-211))
-SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQFRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEES----FEDSCDEAEQRLLALARS-
General information:
TITO was launched using:
RESULT:
Template:
3KEG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120289 for 1607 contacts (-74.9/contact) +
2D Compatibility (PS) -23137 + (NN) -15722 + (LL) 80
1D Compatibility (HY) -26400 + (ID) 10250
Total energy: -195718.0 ( -121.79 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3KEG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KEG-query.scw
PDB file :
Tito_Scwrl_3KEG.pdb
: