Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDTLRHARVIILGSGPAGYSAAVYAARANLKPLLITGMQA-----GGQLTTTTEVDNWPGDPHGLTGPALMQRMQEHAERFETEIVFDHIHAVDLAGKPFTL----RGDNGTYTCDALIVATGASARYLGLPSEQAFMGKGVSACATCDGF-FYRNREVAVIGGGNTAVEEALYLANIASRVTLVHRRETFRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMGVTGVRLK-TRDGGSEEIAVDGMFVAIGHTPNTSLFEGQLALKD-GYLVVNGGREGNATATNVPGVFAAGDVADHVYRQAITSAGAGCMAALDVERYLDSL |
3ITJ Chain:C ((22-337)) | ------HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAV-FRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRAST---KRAEKN---EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPG----SSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239138 for 2637 contacts (-90.7/contact) +
2D Compatibility (PS) -32102 + (NN) -8494 + (LL) 1344
1D Compatibility (HY) -23600 + (ID) 7500
Total energy: -309490.0 ( -117.36 by residue)
QMean score : 0.543
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