Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQQFERSPSESYFWPVVLAVVLHVLIFAMLFVSWAFAPELPPSKPIVQATLYQLKSKSQATTQTNQKIAGEAKKTASKQYEVEQLEQKKLEQQKLEQQKLEQQQVAAAKAAEQKKADEARKAEAQKAAEAKKADEAKKAAEAKAAEQKKQADIAKKRAEDEAKKKAAEDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAVEAAKKKAAAAAAAARKAAEDKKARALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSARNGMSVEVLIEMLPDGTITNASVSRSSGDKPFDSSAVAAVRNVGRIPEMQQLPRATFDSLYRQRRIIFKPEDLSL |
| 1TOL Chain:A ((125-215)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGADINNYAGQIKSAIESKFYDASSYA-GKTCTLRIKLAPDGMLLDIKPE--GGDPALCQAALAAAKL----AKIPKPPSQAVYEVFKNAPLDFKPAAA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38137 for 624 contacts (-61.1/contact) +
2D Compatibility (PS) -9720 + (NN) -4684 + (LL) 24820
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -30921.0 ( -49.55 by residue)
QMean score : 0.379
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