Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDLSTWNLTIPQGRPAITISTSQLQRDYRSDYFQRTADGIRFWVPVNGSHTRNSEFPRSELRETLSSGRPYNWRYARADNWLEATLRIEA-VPS-TRRMIIGQI-HSDGSN---SGQAAPLVKLLYQLRLDQGRVQALVRERP--D-DGGTRA--YTLMDGIPLGQPFSYRIGVSR----SGLLSVSVNGSALEQQLD--PQWAYQGLY-FKAGLYLQDNRGPS-----SEGGRATFSELRVSHQ |
2ZZJ Chain:A ((36-226)) | --------------------------------------SALKMTQTYTP---GYTGRYHSEVDHNR------GYQRG-EEQFYGFAFRLSEDWQFQPQSYNIAQFIANRPGAGCGGDDWMPSTMIWIQN----NQLYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAKVHEEYNVATTVDDDSVFQFRVGLYANSWHDDGHMTGTQGFRQVWYDEVAVGTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZZJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55863 for 1181 contacts (-47.3/contact) +
2D Compatibility (PS) -17397 + (NN) 2624 + (LL) 2548
1D Compatibility (HY) -8800 + (ID) 850
Total energy: -77738.0 ( -65.82 by residue)
QMean score : 0.285
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