Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRIRIIDSHTGGEPTRLVIGGFPDLGQGDMAERRRLLGER---HDAWRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSG-YLGMCGHGTIGLVASLAHLGRIGPGVHRIETPVGEVEATLHEDGSVSV-RNVPAYRYRR-----QVSVEVPGI----GRVSGDIAWGGNWFFLVAG-H-GQ----RLAGDNLDALTAYTVAVQQALDDQDIRGEDGGAIDHIELFADDPHADSRNFVLCPGKAY-DRSPCGTGTSAKLACLAADGKLLPGQPWRQASVIGSQFEGRYEWLDGQPGGPIVPTIRGRAHVSAEATLLLADDDPFAWGIRR |
| 2GKE Chain:A ((2-274)) | ----QFSKMHGLGNDFVVVDGVTQ-NVFFT-PETIRRLANRHCGIGFDQL--------------LIVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLE-SHER---------------FPERVNAGFMQIINK-EHIKLRVYE--R--GAGETQACGSGACAAVAVGIMQGLLN-NNVQVD--LPGGSLMIEWNGV------GHPLYMTGEATHIYDGFITL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102541 for 2213 contacts (-46.3/contact) +
2D Compatibility (PS) -26938 + (NN) -9344 + (LL) 2724
1D Compatibility (HY) -400 + (ID) 2200
Total energy: -138699.0 ( -62.67 by residue)
QMean score : 0.350
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