Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPREHGKRSIDNETRSALKRQRPAVIWLTGLSGAGKSTIASALELALFEQKKHTFLLDGDDLRLGLCRNLGYSDEDRTENIRRIAEVAKILLEAGLIVIVATISPFSRDRRLSRELIGIEH------FIEVFVDTPLSECERRDPKGLYRKARSGKIENFTGIDSIYETPAQPNITIDTLSEDPDLAVKRIISYLETNQPA
2OFW Chain:H ((32-201))
----------------------RGCTIWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQI----HEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEKPEAPELVLKTDSCDVNDCVQQVVELLNERDIL
General information:
TITO was launched using:
RESULT:
Template:
2OFW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102540 for 1338 contacts (-76.6/contact) +
2D Compatibility (PS) -18424 + (NN) -11623 + (LL) 1420
1D Compatibility (HY) -14000 + (ID) 4400
Total energy: -149567.0 ( -111.78 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_2OFW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OFW-query.scw
PDB file :
Tito_Scwrl_2OFW.pdb
: