Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALAR-SGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWAQ--S-RDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRANGLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 2YLN Chain:A ((74-279)) | -----------------------------------------------DKDGKLTGYDVEVTRAVAEKLGV---KVEFK--ETQWDSMMAGLKAG--RFDVVANQVGLTSPERQATFDKS-EPYSWSGA---VLVAHNDS-----NIKSIADIKGVKTAQSLTSNYGEKAKAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN--AGVKIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98658 for 1533 contacts (-64.4/contact) +
2D Compatibility (PS) -21411 + (NN) -3743 + (LL) 6404
1D Compatibility (HY) 800 + (ID) 1200
Total energy: -117808.0 ( -76.85 by residue)
QMean score : 0.448
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