Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIACLDLEGVLVPE-IWIAFAEKTGIDAL-KATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA--TLKPLEGAVEFVDWLRE-RFQVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQ----LRQKDPKRQSVIAFKS--LYYRVIAAGDSYNDTTMLSEAHAGILFHAPENV--IREFPQFPAVHTYEDLKREFLKASSRSLSL
1NNL Chain:A ((14-221))
ADAVCFDVDSTVIREEGIDELAKICGVEDAV--------PFKAALTERLALI---QPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKW-YITDFVELLG------------
General information:
TITO was launched using:
RESULT:
Template:
1NNL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140882 for 1465 contacts (-96.2/contact) +
2D Compatibility (PS) -19285 + (NN) -6707 + (LL) 1292
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -175682.0 ( -119.92 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_1NNL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NNL-query.scw
PDB file :
Tito_Scwrl_1NNL.pdb
: