Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPG----LAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAH--LDASLLLERIHPDKDVDGFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGIN-----RQADGR-LVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD |
| 1DIA Chain:B ((4-294)) | --AEILNGKEISAQIRARLKNQVTQLKEQ---VPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVPDDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -199500 for 2359 contacts (-84.6/contact) +
2D Compatibility (PS) -30600 + (NN) -14868 + (LL) 364
1D Compatibility (HY) -28400 + (ID) 6400
Total energy: -279404.0 ( -118.44 by residue)
QMean score : 0.561
|
|
|