Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLLAGSFAALFLSLSAQAADCTFTQLEIVPQFGSPNMFGGEDEHVRVMFSNEDPNDDNPDAFPEPPVYLADRDSGNDCRIEDGGIWSRGGVFLSQDGRRVLMHEFSGSSAELVSYDSAT--CKVVHREDISGQRWAVDKDGLRLGQKCSGESVDSCAKIVKRSLAPFCQTAKK |
1QKS Chain:A ((202-237)) | -------------------------------------------------------------------------------------------SRLSASGRYLFVIG---RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8063 for 172 contacts (-46.9/contact) +
2D Compatibility (PS) -3462 + (NN) -1046 + (LL) 3316
1D Compatibility (HY) -800 + (ID) 300
Total energy: -10355.0 ( -60.20 by residue)
QMean score : 0.308
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