Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRTVEDVDMLNHHFRVCSATVYRPPGDGCQSATSQPSAWWMAAKESRSGQLRRVEHVAFEGHPAAVLAGRAVEDRAVVGEADGQAEADVGSVLRGVQLAFEVQLEHARLDAFQADGDVRVVHGLAFAAALLGADGEGHGVSVHVLLQLAWGRRRQRGGQTTGRRAGWPVLAAVGAARGLGIIRRRRSPTAHHQPTPEGMMKLPVLAVLGAALLLSACAKKEAEACASPDVKDQLMRIFLQGAITERSPEFKDSALRDVAILEKDPDSGVLSCVGTLSVPAGQQVVEGVLQYRIAPVAKSDYDYLLLDTAGANTTALAQRLNKALGQ |
| 4YMU Chain:C ((1-214)) | -----------------------------------------------------------------------MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIR-----GTPLLVQLLLIYNGLMQFGMNIPAFTAGVSALAINSSAYVAEIIRAGI------QAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVI--------------------------GFADLTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41640 for 1582 contacts (-26.3/contact) +
2D Compatibility (PS) -22995 + (NN) -10166 + (LL) 5932
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -77319.0 ( -48.87 by residue)
QMean score : 0.199
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