Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MSIEIDSEQGV----CSVEIEGSRHRAPVDSLRIGTDAEARLSVLYIDGK---RLHISEEDAQRLVVAGAEDQRRHLMADD
3E8V Chain:A ((1-82))
AKGSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFG-KDNELKITLDK
General information:
TITO was launched using:
RESULT:
Template:
3E8V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20271 for 458 contacts (-44.3/contact) +
2D Compatibility (PS) -7363 + (NN) 968 + (LL) 144
1D Compatibility (HY) 2400 + (ID) 550
Total energy: -24672.0 ( -53.87 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_3E8V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E8V-query.scw
PDB file :
Tito_Scwrl_3E8V.pdb
: