Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSGHEATSTPPRRSHWRWLRRLLTLAFFVLVPVLLFLLVKNLDWQEVRHALGEYRPATLFLGLLLAAAGYTVFSSFDLLSRYYIGHSLPKRRVFTVAFVCNAFNLNLSSWVGAVALRYRLYSRLGLDIADITRILTFSLVTNWFGYLLLAGILFSCGLPALPPGWKLGSDGLRLIGALLLALAAGYLLACRFARRRAWGWREHRLTLPSWRLAALQGLLGA-SNWSLMALLLYSLLPHSVDYPSVLAILLISSIAGVITHIPAGLGVLEAVFIALLQGRLSQGVLLAALIGYRVLYFLLPLALACVVYLLLERRAIRLRRKQRRLRQGQA |
| 5A41 Chain:A ((2-128)) | -------------------------------------------------------------------------------------------------------------------------------------LTYAPLNFIAIGIGATLGAWLRWVLGLKLNGAGWPWGTLTANLVGGYLIGVMVALIAS-------------HPEWPAWIRLAAVTGFLGGLTTFSTFSAETVDMLCR--GVYATAAAYAGASLAGSLAMTGLGLATVRLLLR--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86148 for 870 contacts (-99.0/contact) +
2D Compatibility (PS) -13055 + (NN) -6151 + (LL) 18528
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -93776.0 ( -107.79 by residue)
QMean score : 0.213
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