Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSYDDTRQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSFYHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLSAEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASALYQLWLGASLLSKLHRSPGPLETAMQTTRSLLEI
4L62 Chain:K ((1-190))
---SYDDTRQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSFYHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLSAEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASALYQLWLGASLLSKLHRSPGPLETAMQTTRSLLE-
General information:
TITO was launched using:
RESULT:
Template:
4L62.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107557 for 1375 contacts (-78.2/contact) +
2D Compatibility (PS) -20475 + (NN) -9002 + (LL) 528
1D Compatibility (HY) -26800 + (ID) 9500
Total energy: -172806.0 ( -125.68 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_4L62.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L62-query.scw
PDB file :
Tito_Scwrl_4L62.pdb
: