Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDALPEAHGLLGASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELAGWVRAGEWKKSVGAAQ----FGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYHSHSPKPHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFEREPLSPDSPLLRLPNVVATPHIGSATEETREAMARCAVDNLLAALAGARPLNLVNPSAWARRRGA |
2DBR Chain:B ((54-322)) | ---------------------------------------------------SERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAK-GFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYY-NEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIPPTLVN---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154240 for 2136 contacts (-72.2/contact) +
2D Compatibility (PS) -28829 + (NN) -13021 + (LL) 4848
1D Compatibility (HY) -28000 + (ID) 6800
Total energy: -226042.0 ( -105.82 by residue)
QMean score : 0.497
|
|
|