Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDYATTAAGFDLQRTAAATLSGTLQALNACVECCDRHALPG--RIALFWEGKDGSRASY-TFSELKALSGRFANFLQAQGVRPGDCVAGLLPRTPELLVTILGAWRLGAVYQPLFTAFGPKAIEHRVATAGSKVLVTDAA----------NRDKLDELADPPLA----VTVGGPKGQGI--RRGDFSFWAEL-ERYPAEFEPVPRSGEDPFLMMFTSGTTGLAKPVPVPLKAILAFVGY-LREAVDLRPEDAFWNLADPGWAYGLYYAVAGPLAMGHPTTFYEGPFSVES---TCRIIRDYGITNLAGSPTAYRLLMAAG-AAAETALKGRLRAVSSAGEPLTPEVIRWFADRLGTT---IHDHYGQTELGMVLCNHHALAHPVRVGAAGFACPGHRVVVLDDD-------------LNELPPGQPGILALDRRRSPLMWFPGYQGLETAAFVGDYYLSGDTVELNEDGSISFVGRADDVITTSGYRVGPFDVESALIEHPAVMEAAVIGKPDPERTELVKAFVVLCAGHRPTPELADALQRYVRQRLSAHAYPREIEFLEELPKTPSGKIQRFLLRNQEIARQREAAPRAAAAN |
2P20 Chain:B ((75-625)) | ---------------------------LNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNM---------YFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVAKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280779 for 4357 contacts (-64.4/contact) +
2D Compatibility (PS) -54273 + (NN) -26661 + (LL) 4496
1D Compatibility (HY) -24800 + (ID) 8600
Total energy: -390617.0 ( -89.65 by residue)
QMean score : 0.499
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