Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEVKHSRLIILGSGPAGYTAAVYAARANLKPVVI-----TGIQPGGQLTTTTEVDNWPGDVEGLTGPALMTRMQQHAERFDTEIVYDHIHTAELQQRPFTL----KGDSGTYTCDALIIATGASAQYLGMSSEEAFMGKGVSACATCDGF-FYRNQVVCVVGGGNTAVEEALYLANIAKEVHLIHRRDKLRSEKILQDKLFDKAENGNVHLHWNTTLDEVLGDASGVTGVRLKSTIDGSTSELSLAGVFIAIGHKPNTDLFQGQLEMRD-GYLRIHGGSEGNATQTSIEGVFAAGDVADHVYRQAITSAGAGCMAALDAEKYLDDH |
3ITJ Chain:C ((22-334)) | -----HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAV-FRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRAST---KR---AEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGS----SLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215746 for 2619 contacts (-82.4/contact) +
2D Compatibility (PS) -32033 + (NN) -9358 + (LL) 1292
1D Compatibility (HY) -23200 + (ID) 6950
Total energy: -285995.0 ( -109.20 by residue)
QMean score : 0.499
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