Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSALSIRQLTKTYGNG---FQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVSVFGHDL----DKDPAGLKRCLGVVPQEFNFNQFEKVFDIVVTQAGYYGIPAKIAKERAERYLTQLGLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTELNQE-GISIILTTHYLEEAEQLCRNIAIIDHGEIVQNTSMRDLLMTLHSETFLLDLKNVQALPPTLDGYPTRLVDDHTLEVQVEKSQGINDLFAQLGAQGIEVLSLRNKTNRLEELFVSLVEKNLTRIAR |
3TUI Chain:D ((25-252)) | ----IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVF-------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -153858 for 1796 contacts (-85.7/contact) +
2D Compatibility (PS) -23604 + (NN) -4213 + (LL) 6876
1D Compatibility (HY) -17600 + (ID) 3550
Total energy: -195949.0 ( -109.10 by residue)
QMean score : 0.564
|
|
|