Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKSLLPLGLAIGLASLAASPLIQASTYTQTKYPIVLAHGMLGFDNILGV-DYWFGIPSALRRDGAQVYVTEVSQLDTSEV---RGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADFLRQI---PPGSAGEAVLSGLVNSLGALISFLSSGSTGTQNSLGSLESLNSEGAARFNAKYPQ---GIPTSACGEGA--YKVNGVSY--YSWSGSS---------------------PLTNFLDPSDAFLGASSLTFKNGTA--NDGLVGTCSSHLGMVIRDNYRMNHLDEVNQVFGLTSLFETSPVSVYRQHANRLKNASL |
| 1TAH Chain:A ((2-314)) | ---------------------------TYAATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFADFVQDVLKTDPTGLSSTVIAAFVNVFGTLV---SSSHNTDQDALAALRTLTTAQTATYNRNFPSAGLGAPGS-CQTGAATETVGGSQHLLYSWGGTAIQPTSTVLGVTGATDTSTGTLDVANVTDPSTLALLATGAVMINRASGQNDGLVSRCSSLFGQVISTSYHWNHLDEINQLLGVRGANAEDPVAVIRTHVNRLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64212 for 2517 contacts (-25.5/contact) +
2D Compatibility (PS) -29392 + (NN) -6651 + (LL) 2780
1D Compatibility (HY) -22400 + (ID) 6300
Total energy: -126175.0 ( -50.13 by residue)
QMean score : 0.437
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