Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNRMMITGAGSGLGREIALRWARDGWRLALADVNEAGLAESLKLVREAGGDGFTQRCDVRDYSQLTALAQSCEEKFGGIDVIVNNAGVASGGFFGELSLEDWDWQIAINLIGVVKGCKAFLP---LLERSKGKIVNIASMAALMQGPAMSNYNVAKAGVVALSESLLVELALVEVGVHVVCPSFFQTNLLDSFRGPSPEMKHQVGKLLESSPISAADIADYIHAEVAKGSFLILPHEQARMAWRIKQQNPQAIYDEMTAMAGKMQAKRQRQA |
1W4Z Chain:B ((30-255)) | -----LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR-------EHY----------TEEAFDRITARVPIGRY-VQPSEVAEM------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129546 for 1781 contacts (-72.7/contact) +
2D Compatibility (PS) -22734 + (NN) -3656 + (LL) 4000
1D Compatibility (HY) -12400 + (ID) 4200
Total energy: -168536.0 ( -94.63 by residue)
QMean score : 0.535
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