Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLE-----VATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRN----VGNDSAGYFDEASVTYTGFNPVNLKF---GRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSEN-NNDTDGDSVKRYNLRGVFAPLHEPG-NVVHLGLQYAYRDLEDSAVDTRI--------RPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLE-----GAWALGAFSAQAEYLRRTVKAERDRED---------LKASGYYAQLAYTL------TGEPRLYKLDGA---KFDTIKPENKEIG-AWELFYRYDSIKVEDDNIVVDSATREVGDA-KGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
| 4O2X Chain:A ((5-483)) | EGKLVIWINGDKG--------YNGLAEVGKKFEKDT---GIKVTVEHPDKLEEKFPQVAATGDGPDIIFWA--HDRFGGYAQSGLLAEITPDKAFQDKLY-PFTWDAVRYNGKLIAYPIAVEALSLIYNKD--LLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTD---------YSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPN---KELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALAAAQTNAAANLEKIKKLRNVITSAWKVILYNDDIH--NFTYVTDVIVKVVGQISKAKAHTITVEAHSTGQALILSTWKSKAEKYCQELQQN----GLTVSIIHES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4817 for 3215 contacts (-1.5/contact) +
2D Compatibility (PS) -41416 + (NN) 2702 + (LL) 940
1D Compatibility (HY) -12000 + (ID) 3900
Total energy: -58491.0 ( -18.19 by residue)
QMean score : 0.209
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