Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDA-AFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAA--GVAHATPAAAAAEVGVVGVQELPHDLALAA
1DK0 Chain:B ((2-174))
-AFSVNYDSSFGGYSIHDYLGQWASTFGDVNHTNGNVTD-ANSGGFYGGSLSGSQYAISSTANQVTAFVAGGNLTYTLFNEPAHTLYGQLDSLSFGDGLSGGDTSP-YSIQVPDVSFGGLNLSSLQAQGHDGVVHQVVYGLMSGDTGALETALNGILD--DYGLSVNSTFDQVAAATA------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93131 for 1346 contacts (-69.2/contact) +
2D Compatibility (PS) -18706 + (NN) -13792 + (LL) 2436
1D Compatibility (HY) -18000 + (ID) 4550
Total energy: -145743.0 ( -108.28 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_1DK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DK0-query.scw
PDB file :
Tito_Scwrl_1DK0.pdb
: