Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTE-EGGYAGFDVDMAQRLAESL-G--AKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARA----NLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQQPFDFAEKAYLLP-RDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK |
| 2V25 Chain:A ((29-258)) | ---------------------------GKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEK--KYKSLADMK--GANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDK--SEIL--PDSFEPQSYGIVTKKDDPAFAKYVDDFVKEHK--NEIDALAKKWG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118113 for 1826 contacts (-64.7/contact) +
2D Compatibility (PS) -24829 + (NN) -12295 + (LL) 3588
1D Compatibility (HY) -4800 + (ID) 2350
Total energy: -158799.0 ( -86.97 by residue)
QMean score : 0.450
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