Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIIETIKEQIANNPILLYMKGSPNAPQCGFSSRAAQVLMACGEKFAYVDILQNPEIRANLPKYANWPTFPQLWVNGELVGGSDILAEMFEKGELQTLVKDAAAKANA
2YAN Chain:B ((19-103))
---------------VMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVKGELVGGLDIVKELKENGELLPILR--------
General information:
TITO was launched using:
RESULT:
Template:
2YAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73162 for 588 contacts (-124.4/contact) +
2D Compatibility (PS) -9335 + (NN) -4977 + (LL) 1864
1D Compatibility (HY) -10000 + (ID) 1900
Total energy: -97510.0 ( -165.83 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_2YAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YAN-query.scw
PDB file :
Tito_Scwrl_2YAN.pdb
: