Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSRSVNPRPSFAPRALSLAIALLLGAPAFAANSGEAPKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQW--GDWSAYFMGQAVAATDTIETDTLQSDTDDGNNSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLRED-----SGQWQDTNIEALNWSFET-TLLNAHAGVAQRFSEYRTDLD-ELAPE-----DKDRTHVFGDISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGG-GKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLRE----DYDASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKQGLLPASMSQYVDEPSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF |
| 2Y0H Chain:A ((6-388)) | ---------------------------------------SSAHLDLRNFYQLRDYRQ------SQAGNWSQGFVLRLQSGFTGGPLGFGLDATGLLGVKL----------------------PVDDYSHLG-LTAKLRY----SQTQLQVGILMPQLPVAFRDDVRLLPQTFDGALLTSSEIEGLTLTAGQLWKSRTRE---SDDMYIMGRDKAHASDEFNLAGATYAFTPRLSASYYYGQLKDIY------------------RQHYLGLLHTLPLG---EGLSLRSDLRYFDSGEDGAAI---------------SGPVDNRNLNAMLTLRAG-AHAFGIGVQKMIGNDAFPVLNGY-----T-TPYVANLM--------AYQTFTRPQEKSWQLRYDYDFAGLGLPGLNLMTRYVQGRDIDRGA------------GRADDSEWERNTDLSYVIQSGPL----------KSVALKWRNITYRSRY----GADLDENRFIVNYTL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 69735 for 2551 contacts (27.3/contact) +
2D Compatibility (PS) -34911 + (NN) -6000 + (LL) 6260
1D Compatibility (HY) -1200 + (ID) 1900
Total energy: 31984.0 ( 12.54 by residue)
QMean score : 0.076
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