Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHNPHESKTDLGAPLDGAVMVLLVDDQAMIGEAVRRSLASEAGIDFH--FCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFAAGANDYLVKLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQPVPPAPAG |
| 1W25 Chain:B ((155-448)) | --------------------VLIVDDN----ERQAQRVAAELGVEHRPVIESDPEKAKISAGGPVDLVIV-NAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQI-------QRKRYTDYLRNNLDHSLE-------LAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSA--TAGEGDTPEALLKRADEGVYQAKASGRNAV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150167 for 2289 contacts (-65.6/contact) +
2D Compatibility (PS) -32448 + (NN) -20749 + (LL) 3244
1D Compatibility (HY) -13200 + (ID) 5450
Total energy: -218770.0 ( -95.57 by residue)
QMean score : 0.516
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