Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MS---------LNTPRNKPSRTETEAVAASSGRSAVGRRDYT---EQLRRAARRNAWDLYGEHFY
2DZN Chain:B ((360-416))
MSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVK--------
General information:
TITO was launched using:
RESULT:
Template:
2DZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9565 for 244 contacts (39.2/contact) +
2D Compatibility (PS) -4967 + (NN) -3807 + (LL) 392
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -1367.0 ( -5.60 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_2DZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZN-query.scw
PDB file :
Tito_Scwrl_2DZN.pdb
: