Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MNSNRYPLPAQTGLVVAPGLPPKNSTLRPDQLNKRL---SSAWHHLYDLCPE----LLKI------DPPDGLTILRGFLQWAAEQKAAWNWAMHLRLYC----------WLLQ------SPFGAKVTDEHLEVLMDASAARWTVDDTSANRGIL------LASQGGAHITQDWKAPQAGAGTRVPLERLDLPAPNWTF-AYCAVPDPRLREFPGWKPLPARGSLVG--- |
| 4QPI Chain:A ((3-275)) | DDSGGFSTTVSTEQNVPDPQVGITTMRMDVSGVQAPVGAITTIEDPVLAKKVPETFPELKPGESRHTSDHMSIYKFMGRSHFLCTFTFNSNNKEYTFPITLSSTSNPPHGLP---STLRWFFNLFQLYRGPLDLTIIITGATDVDGMAWFTPVGLAVDTPWVEKESALQIDYKTALGAVRFNTRRTGNIQIRLPWYSYLYAVSGALDGLGDKTDSTFG-LVSIQIANYNHSDEYLSFSCYLSVTEQSEFYFP-RAPLNSNAMLSTESM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45821 for 1050 contacts (-43.6/contact) +
2D Compatibility (PS) -19750 + (NN) -9167 + (LL) 452
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -81636.0 ( -77.75 by residue)
QMean score : 0.120
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