Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPAETPPLRPDADPPQCALPEARPDRDASTKLRAAVLGANDGLVSNL------------------------------------------CLVMGVAGASMAHSSIVLTGMAGLVSGACSMALGEWLSVT-NAREMASKRIAEE---ERLLRLCPNTETQELIDIFTAK----------GLSEVSARRVALQLMNDGRGALDTLSREALGIDPTELGGNPWNAAGTSFLLFSLGALVPVAPFLFLDGAAALVA-----SLLSSLLALLFSGAVTARFT-------GRPLAFSALRQVLVGTLAAAFTYGLGTALGVGLG--------- |
| 2VIU Chain:A ((9-328)) | -STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFT-----WTGVIQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGIHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVR-GLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72590 for 1501 contacts (-48.4/contact) +
2D Compatibility (PS) -23984 + (NN) 11080 + (LL) 812
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: -89782.0 ( -59.81 by residue)
QMean score : -0.020
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