Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKRPVALLVDETHDLNGHT--LTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLRRPTMEEIGYRTDIFELQEKMQSAGLPV
2QBY Chain:B ((133-172))
------------------------------------------------IRAIIYLDEVDTLVKRRGGDIVLYQLLRS----DA--NISVIMISN-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QBY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18281 for 179 contacts (-102.1/contact) +
2D Compatibility (PS) -4355 + (NN) -3378 + (LL) 7416
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -22148.0 ( -123.73 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2QBY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QBY-query.scw
PDB file :
Tito_Scwrl_2QBY.pdb
: