Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQPVAFVTGCSSGIGRALA-----DAFQRAGYRVWASARKE-------DDVRALA--EAGFQAVQLDVNDAAALARLAEELGVEAAGLDVLVNNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP-LLRRKSGLVVNVGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVEVLEVQPGAIASNFGASASREMDSVVDERSPWWPLRRQIQARAAASQ------DNPTSAEDFARQLLAAVQRRPRPPLVRIGNGSRALPALARWLPRGLLERLLKKRFGLDTRL |
| 1FDV Chain:A ((4-263)) | ----VVLITGCSSGIGLHLAVRLASDPSQ--SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLD-RTDIHTFHRFYQYLALSKQVFREAAQNP---EEVAEVFLTAL-RAPKPTL-RYFTTERFLPLL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109993 for 1873 contacts (-58.7/contact) +
2D Compatibility (PS) -26298 + (NN) -15372 + (LL) 2880
1D Compatibility (HY) -20400 + (ID) 4700
Total energy: -173883.0 ( -92.84 by residue)
QMean score : 0.463
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