Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAPLMHRFHSFVAASAVAIALCVGTAHAGLIAQGTRVVFPASEREVTLRVSNTS-GTPVLAQAWID--DGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIA-YLKAPLPTDRESLFWLNILEVPPRDEDENNALQFSFRSRFKLFFRPSQLK-SVDSAAGKLQWKFLESGGAGKKTVVQVNNPTPYYVSFASVELIVDGRVMSVGKGMVAPFSTKEFDWQGNPKNMEAASVRYEVINDYGGRNTHDRALGK
3SQB Chain:C ((1-195))----------------------------GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGR-------FIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSM----ENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFR----RSANSLTLI---NPTPYYLTV--TELNAGTRVLE--NALVPPMGESTVKLPSD----AGSNITYRTINDYGA----------


General information:
TITO was launched using:
RESULT:

Template: 3SQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86860 for 1231 contacts (-70.6/contact) +
2D Compatibility (PS) -20099 + (NN) -9773 + (LL) 4564
1D Compatibility (HY) -15600 + (ID) 3400
Total energy: -131168.0 ( -106.55 by residue)
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_3SQB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SQB-query.scw
PDB file : Tito_Scwrl_3SQB.pdb: