Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
1IIJ Chain:A ((17-32))
-----------VLLFLILVVVVGILIK-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IIJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8915 for 62 contacts (-143.8/contact) +
2D Compatibility (PS) -1594 + (NN) 536 + (LL) 3572
1D Compatibility (HY) -4000 + (ID) 150
Total energy: -10551.0 ( -170.18 by residue)
QMean score : 0.077
(partial model without unconserved sides chains):
PDB file :
Tito_1IIJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IIJ-query.scw
PDB file :
Tito_Scwrl_1IIJ.pdb
: