Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNARWVSDSLTTFVRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDLQEVPGQAERLPQLEQKVAALTAELDGINDTWKTRVQGMQETLDTRKKLIDELQAARSNLDAELGKARSDLRAVQAQLGDENKQVLMRYMVYGGSIAGAGLFAGLILPSLLRVRRKRNDKWF |
3NPF Chain:A ((11-72)) | -----------------------------------------SAYGVVHISVCNLREEGKFTSGMSTQALLGMPVKVLQ-YNGWYEIQTPDDYTGWVHRMVITPMSK-------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10431 for 419 contacts (-24.9/contact) +
2D Compatibility (PS) -7158 + (NN) -7880 + (LL) 11184
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -16685.0 ( -39.82 by residue)
QMean score : 0.430
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