Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRSTGIGVSRWLGGLLG---VALALP----ALALPQGCIELLAQAPRVDVVQ-GQQRDLRLAVPIE-------RLAIGDPKIADVQ---LLDRRGFLVTGKEQGSTSLLIWTGCSPEPLRSLVEVEGRGSVDTRGAPAFTVGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFN----LIFGGGKWLSFMNALEGSGFAYTLARPSLVAMSGQSASFLAGGE-FPIPVPNGTNDNVTI---EYKEFGIRLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVPALRVRRTDTSVMLADGESFVISGLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDPGFSRLYFLERGEYDGQQNDTGLSD |
| 1OKE Chain:A ((1-394)) | M-RCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPTLDFELIKTEAKQPATLRKYCIEAKLTNTTTESRCPTQGEPTLNEEQDKRFVCKHSMVDRGWGNG---------CGLF---------GKGGIVTCAMFTCKKNMEGKIVQPENLEYTVVITPHSGEEHAVGNDTGKHGKEVKITPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLLQMKDKAWLVHRQWFL------DLPLPWLPGADTQGSNWIQKETLVTFKNPHAKKQDVVVLGSQEGAMHTALTGATEIQMS-----------SGNLLFTGHLKCRLRMDKLQLKGMSYS--MCTGKFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTEKDSPVNIEAEPPFG----------DSYIIIGVEPGQLKLNWFKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29435 for 2687 contacts (-11.0/contact) +
2D Compatibility (PS) -37162 + (NN) 2553 + (LL) 3412
1D Compatibility (HY) -7200 + (ID) 2900
Total energy: -70732.0 ( -26.32 by residue)
QMean score : 0.073
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