Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRMPLATASLLALAISLAGCGDDKKAEAPATPAASTQPAAPAAAPAAKVDEAAAKAVIKNYADLAEATFADALSTAKDLQKAIDAFLAKPDAETLKAAKEAWFAARTPYSQSEAFRFGNAIIDDWEGQVNAWPLDEGLIDYVAKDYQHALGNPGATANIVANTEIQVGEDKIDVKEITGEKLASLNELGGS-------EANVATGYHAIEFLLWGQDLNGTGPGAGNRPATDYAQGKDCTGGHCDRRAAYLKAVTDLLVSDLEYMAGQWKAGVADNYRAKLEAEPVDTGLRKMFFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDDTHHTLFFNGKSIRNIYLGEYKRIDGSVVKGPSLADLVAKADAAANDTLKADLADTEAKLQAIVDSAEKDGVHFDQMIAPDNKDGQQKIRDAIAALVKQTGAIEQAAGKLGIQDLKPDNADHEF |
| 3AT7 Chain:A ((25-275)) | -------------------------------------------------VAPLDLVQPISDYKIYVSENLQTLVRDTREFTNAVKA-------GDVAKAKKLFASTRMSYERIEPIA-------------ELFSDLDASIDSRADDHEKAEKDPAFFGFHRIEYGLFAQNSAKGLAPVADKLMADVLELQKRIRGLTFPPEKVVGGAAVLMEEVAATKISGEEDRYSHTDLWDFQANFEGAKKIVDLFRPLVVKDNRAFADKVDANFDTVFKTLAKYRTADGGFELYGK-LSERDRKVLAGRVNTLAEDLSKMRGLLGLDL------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6244 for 1981 contacts (3.2/contact) +
2D Compatibility (PS) -25609 + (NN) -9007 + (LL) 11912
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -21210.0 ( -10.71 by residue)
QMean score : 0.361
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