Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRG----------KGLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAG--------------------------TANRSLA-------------PIARRVCEAFPDTFPA-----SDKRLTTGNPVRGELFLDAHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAE-ITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 3RSC Chain:A ((20-413)) | -MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGG--FAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPF-IAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRRFLG-EWTRPADDLPVVLVSLGTTFND-RP-GFFRDCARAFDG-QPWHVVMTLGGQVDPAALG----DLPPNVEAHRWVPHV-KVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQ----SFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRRAGGAARAADAVEAYLA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -177615 for 3008 contacts (-59.0/contact) +
2D Compatibility (PS) -36906 + (NN) -13305 + (LL) 1184
1D Compatibility (HY) -9600 + (ID) 3000
Total energy: -239242.0 ( -79.54 by residue)
QMean score : 0.518
|
|
|