Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQPQAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQAALVRKAIQQG-GSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNEYRSALVELSEFAVARTH |
4JYX Chain:D ((35-343)) | ------------DMLAVNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDVVDE--------TANEVFGNQASVLVGDFLYTRSFQMMVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYA---------MGDDLAEGKPTLPLLYAMWHGNEQQTAIIREAIETGNGMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSPIEESVYKEALIGLAHISVER-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174803 for 2399 contacts (-72.9/contact) +
2D Compatibility (PS) -32316 + (NN) -19606 + (LL) 1660
1D Compatibility (HY) -33200 + (ID) 7700
Total energy: -265965.0 ( -110.86 by residue)
QMean score : 0.590
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