Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQSSQLLPLGSLLLSFATPLAQADALHDQASALFKPIPEQVTELRGQPISEQQRELGKKLFFDPRLSRSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRNSPTVFNAVFNAAQFWDGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLYLKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNVALTAPYFHSGQVWELKDAVAIMGNAQLGKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPASTETTPRPAE |
| 1ZZH Chain:D ((4-324)) | ------------------------ALREEAKGLFEVIPMQAPQ-----VTRDKIDLGAMLFFDPRMSKSGVFSCQSCHNVGLGGVDGLETSIGHGWQKGPRNAPTALNAVFNVAQFWDGRAPDLAAQA---------MNNTPENLVATVQSMPGYVEAFAKAFPGQKDPISFDNFALAVEAFEATLITPNSKFDQWLMGADGAMSADEKAGLKLFIDTGCAACHNGINIGGNGYYPFGVVEKP----------GRFAVTATADDEYVFRAGPLRNIALTAPYFHSGKVWDLREAVSVMANSQLGATLDDTQVDQITAFLGTLTGEQPEVVHPILPVRSAQTPRP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87968 for 2426 contacts (-36.3/contact) +
2D Compatibility (PS) -32016 + (NN) -24232 + (LL) 2428
1D Compatibility (HY) -30400 + (ID) 8900
Total energy: -181088.0 ( -74.64 by residue)
QMean score : 0.506
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