Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLPEMLAGDWTRAMQKLHSQKA
4OLJ Chain:A ((4-194))
MSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLQDIVPHIG--PNFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAMNQINAYK-
General information:
TITO was launched using:
RESULT:
Template:
4OLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106279 for 1631 contacts (-65.2/contact) +
2D Compatibility (PS) -20545 + (NN) -9858 + (LL) 184
1D Compatibility (HY) -18400 + (ID) 5550
Total energy: -160448.0 ( -98.37 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_4OLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OLJ-query.scw
PDB file :
Tito_Scwrl_4OLJ.pdb
: